PPDB

PPDB	The Plant Proteome Database

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AT5G36160.1 Tyrosine transaminase family protein

Lab Annot.

tyrosine aminotransferase
Mapman: 13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53970.1 11 Arabidopsis thaliana 2E-162 404 56 72 0 (0) _
AT2G20610.1 11 Arabidopsis thaliana 2E-153 411 49 71 222 (113) _
AT4G28420.2 11 Arabidopsis thaliana 3E-149 409 49 69 0 (0) _
Os02g19970.1 7 Oryza sativa 7E-176 397 57 78 0 (0) C
Os02g19924.1 7 Oryza sativa 1E-171 417 56 72 11 (11) _
Os11g35040.1 7 Oryza sativa 2E-164 420 55 72 0 (0) _
Zm00001eb201770_P001 agpv5 Zea mays 9E-172 411 55 75 0 (0) _
GRMZM2G002652_P01 3.21 Zea mays 5E-168 381 58 77 50 (5) _
v1_GRMZM2G002652_P01 4a53 Zea mays 5E-168 381 58 77 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Aminotran_1_2(1) Beta_elim_lyase(1) Cys_Met_Meta_PP(1)
TargetP:	Cytoplasm (Class 3 C0.052; M0.233; S0.049; _0.796)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	420 aa (-cTP 327)
Molecular Weight	46.45 kDA(-cTP )
PI	4.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2225	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 trap

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data