PPDB

 The Plant Proteome Database

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AT5G35735.1   Auxin-responsive family protein
Lab Annot.
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47530.1 11Arabidopsis thaliana4E-13036650680 (0)S
AT4G17280.1 11Arabidopsis thaliana3E-12538947670 (0)S
AT3G25290.1 11Arabidopsis thaliana1E-11237544640 (0)S
Os03g09900.1 7Oryza sativa4E-11835150650 (0)S
Os08g41280.1 7Oryza sativa2E-106347486326 (26)S
Os09g32470.1 7Oryza sativa1E-10434748650 (0)S
v1_GRMZM2G386209_P01 4a53Zea mays2E-11035150660 (0)S
GRMZM2G386209_P01 3.21Zea mays2E-11035150660 (0)S
Zm00001eb035970_P002 agpv5Zea mays2E-11035150660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cytochrom_B561(2) DOMON(1) DUF2427(2) DUF4079(3) DUF568(1)
TargetP: Secreted (Class 2 C0.001; M0.109; S0.904; _0.196)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 404 aa (-cTP 362)
Molecular Weight 43.87 kDA(-cTP )
PI 9.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help