PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G35690.1   zinc metalloproteinase-like protein
Lab Annot. WLM-domian protein
Mapman: 29.5.7.2.8* protein.degradation.metalloprotease.MA(M).M80
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55915.1 11Arabidopsis thaliana8E-1315333490 (0)_
AT1G55915.4 11Arabidopsis thaliana8E-1315333490 (0)_
AT1G55915.2 11Arabidopsis thaliana1E-1215333490 (0)_
Os08g39150.1 7Oryza sativa067345600 (0)_
Os06g09170.2 7Oryza sativa8E-1215133490 (0)_
Os06g09170.1 7Oryza sativa8E-1215133490 (0)_
Zm00001eb034180_P001 agpv5Zea mays065145630 (0)_
GRMZM2G115981_P01 3.21Zea mays3E-4116149630 (0)_
v1_GRMZM2G115981_P01 4a53Zea mays3E-4116149630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF45(1) PUB(2) SprT-like(1) WLM(1)
TargetP: Cytoplasm (Class 2 C0.121; M0.106; S0.020; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 603 aa (-cTP 545)
Molecular Weight 67.74 kDA(-cTP )
PI 4.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help