PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G35620.1 Eukaryotic initiation factor 4E protein

Lab Annot.

eukaryotic translation initiation factor 4E 2 (EIF4E2) - dual cytosol & nucleus
Mapman: 29.2.3 protein.synthesis.initiation

Curated Location

cytosol (Pubmed: 15610358 )
nucleus (Pubmed: 15610358 )

TAIR curated location: nucleus & cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G35620.3 11 Arabidopsis thaliana 2E-146 198 100 100 0 (0) _
AT5G35620.2 11 Arabidopsis thaliana 9E-121 167 99 100 34 (14) _
AT4G18040.1 11 Arabidopsis thaliana 2E-57 172 51 66 24 (9) _
Os10g32970.1 7 Oryza sativa 1E-83 192 66 78 25 (25) _
Os01g73880.1 7 Oryza sativa 6E-58 179 50 65 24 (24) _
Os03g15590.1 7 Oryza sativa 2E-25 172 30 52 13 (13) _
v1_GRMZM2G445905_P01 4a53 Zea mays 1E-83 189 66 77 14 (14) _
Zm00001eb046430_P001 agpv5 Zea mays 1E-83 189 66 77 0 (0) _
GRMZM2G445905_P01 3.21 Zea mays 1E-83 189 66 77 35 (35) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IF4E(1)
TargetP:	Cytoplasm (Class 2 C0.173; M0.081; S0.071; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	198 aa (-cTP 122)
Molecular Weight	22.51 kDA(-cTP )
PI	5.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2287	Detail								[A. thaliana]		Clp C1 WT
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(seedling)
18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data