PPDB

The Plant Proteome Database

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AT5G35600.1   histone deacetylase7

Lab Annot.
Mapman: 27.3.55 RNA.regulation of transcription.HDA
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63110.1 11Arabidopsis thaliana041363760 (0)_
AT4G38130.2 11Arabidopsis thaliana3E-15240955704 (2)_
AT4G38130.1 11Arabidopsis thaliana1E-15140955707 (2)_
Os08g25570.1 7Oryza sativa2E-16740357723 (3)_
Os06g38470.3 7Oryza sativa4E-15139856700 (0)_
Os06g38470.2 7Oryza sativa7E-15139856700 (0)_
Zm00001eb177560_P002 agpv5Zea mays8E-16841257710 (0)_
v1_GRMZM2G136067_P01 4a53Zea mays1E-16740857710 (0)_
GRMZM2G136067_P01 3.21Zea mays1E-16740857714 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hist_deacetyl(1)
TargetP: Cytoplasm (Class 4 C0.029; M0.528; S0.035; _0.790)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 409 aa (-cTP 405)
Molecular Weight 46.02 kDA(-cTP )
PI 5.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help