PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G35570.1 O-fucosyltransferase family protein

Lab Annot.

unknown protein Duf246 domain
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G37980.1 11 Arabidopsis thaliana 0 480 59 75 0 (0) C
AT3G54100.1 11 Arabidopsis thaliana 0 428 61 79 0 (0) _
AT5G01100.1 11 Arabidopsis thaliana 0 430 60 78 0 (0) C
Os09g27080.1 7 Oryza sativa 0 659 60 70 0 (0) _
Os09g27080.2 7 Oryza sativa 0 601 59 68 0 (0) _
Os05g37880.1 7 Oryza sativa 0 418 56 76 0 (0) _
v1_GRMZM2G020856_P01 4a53 Zea mays 0 421 56 76 0 (0) C
Zm00001eb314260_P001 agpv5 Zea mays 0 647 62 73 0 (0) _
GRMZM2G126290_P01 3.21 Zea mays 0 647 62 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	O-FucT(1)
TargetP:	Chloroplast (Class 3 C0.772; M0.054; S0.004; _0.356)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	652 aa (-cTP 618)
Molecular Weight	72.91 kDA(-cTP 69.11)
PI	6.79(-cTP 6.37)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
339	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
875	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1934	Detail								leaf [A. thaliana]	chloroplast	wild-type
1936	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19546170(mature pollen grains)
19888209(80S polysomal fraction)
22060019(phosphoproteome - N-starved seedlings)
22430844(Golgi-cell-culture)

Comparative Proteomics Data