PPDB

PPDB	The Plant Proteome Database

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AT5G35430.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os09g03600.1 7 Oryza sativa 0 807 40 60 14 (14) _
Zm00001eb308130_P001 agpv5 Zea mays 0 820 39 58 0 (0) _
v1_GRMZM2G158575_P02 4a53 Zea mays 3E-176 830 38 59 0 (0) _
Zm00001eb095440_P003 agpv5 Zea mays 3E-176 830 38 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(4) RLL(1) SRP_TPR_like(2) TPR_1(4) TPR_11(3) TPR_12(6) TPR_14(3) TPR_16(3
TargetP:	Cytoplasm (Class 2 C0.142; M0.109; S0.133; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	786 aa (-cTP 758)
Molecular Weight	86.74 kDA(-cTP )
PI	6.26(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
2290	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2300	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data