PPDB

The Plant Proteome Database

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AT5G35400.1   Pseudouridine synthase family protein

Lab Annot. tRNA pseudouridine synthase protein
Mapman: 29.1.30 protein.aa activation.pseudouridylate synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G35400.2 11Arabidopsis thaliana047189891 (1)M
AT3G06950.1 11Arabidopsis thaliana2E-1233723380 (0)C
AT1G20370.1 11Arabidopsis thaliana2E-0914529488 (1)_
Os06g45250.1 7Oryza sativa5E-14642256690 (0)S
Os02g44810.1 7Oryza sativa1E-1114032490 (0)C
Os05g19954.1 7Oryza sativa1E-0813432470 (0)M
GRMZM2G050765_P01 3.21Zea mays2E-14542254670 (0)M
Zm00001eb274430_P001 agpv5Zea mays2E-14542254670 (0)M
v1_GRMZM2G050765_P01 4a53Zea mays2E-14542254670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PseudoU_synth_1(2)
TargetP: Mitochondria (Class 5 C0.064; M0.561; S0.044; _0.375)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 420 aa (-cTP 405)
Molecular Weight 47.65 kDA(-cTP )
PI 6.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1584Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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