PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G35180.1   ENHANCED DISEASE RESISTANCE protein (DUF1336)

Lab Annot. similar to EDR2 (enhanced disease resistance 2)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G35180.2 11Arabidopsis thaliana07771001003 (3)_
AT5G35180.5 11Arabidopsis thaliana078299990 (0)_
AT5G35180.4 11Arabidopsis thaliana081195954 (4)_
Os08g34060.1 7Oryza sativa071562760 (0)_
Os08g34060.2 7Oryza sativa071562760 (0)_
Os08g34060.3 7Oryza sativa071561760 (0)_
GRMZM2G160927_P01 3.21Zea mays2E-16940363761 (0)_
v1_GRMZM2G160927_P01 4a53Zea mays2E-16940363760 (0)_
Zm00001eb041240_P001 agpv5Zea mays7E-15337562760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DNA_pol_phi(1) DUF1336(1) Hus1(1) START(1)
TargetP: Cytoplasm (Class 4 C0.391; M0.085; S0.038; _0.791)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 778 aa (-cTP 731)
Molecular Weight 87.03 kDA(-cTP )
PI 6.96(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21693672(wound-regulated leaf proteome (AOS mutant))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help