PPDB

 The Plant Proteome Database

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AT5G33290.1   xylogalacturonan deficient 1
Lab Annot. xylogalacturonan xylosyltransferase
Mapman: 10.4 cell wall.pectin synthesis
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G42180.1 11Arabidopsis thaliana040262780 (0)S
AT3G42180.4 11Arabidopsis thaliana2E-17833966820 (0)_
AT5G11130.1 11Arabidopsis thaliana3E-16639356730 (0)S
Os02g39960.1 7Oryza sativa5E-13138150670 (0)S
Os07g09050.1 7Oryza sativa1E-12440049650 (0)C
Os04g01930.1 7Oryza sativa2E-11936448650 (0)S
Zm00001eb247030_P001 agpv5Zea mays4E-12935651690 (0)S
v1_GRMZM2G149189_P01 4a53Zea mays4E-12935651690 (0)S
GRMZM2G149189_P01 3.21Zea mays4E-12935651690 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Exostosin(1) Orbi_VP4(1)
TargetP: Secreted (Class 5 C0.012; M0.059; S0.129; _0.012)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 500 aa (-cTP 475)
Molecular Weight 56.60 kDA(-cTP )
PI 9.54(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help