PPDB

PPDB	The Plant Proteome Database

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AT5G28850.1 Calcium-binding EF-hand family protein

Lab Annot.

Mapman: 30.3 signalling.calcium

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G28850.2 11 Arabidopsis thaliana 0 309 99 99 14 (6) _
AT5G28900.1 11 Arabidopsis thaliana 0 309 98 99 14 (6) _
AT1G54450.1 11 Arabidopsis thaliana 0 306 88 93 0 (0) _
Os10g33680.1 7 Oryza sativa 0 306 87 91 21 (21) _
Os02g09840.1 7 Oryza sativa 0 309 78 88 0 (0) _
Os05g05710.1 7 Oryza sativa 8E-20 247 25 46 0 (0) _
Zm00001eb045890_P004 agpv5 Zea mays 0 306 86 92 0 (0) _
Zm00001eb045890_P003 agpv5 Zea mays 0 306 86 92 0 (0) _
GRMZM2G148323_P01 3.21 Zea mays 0 306 86 92 17 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4187(1) EF-hand_1(3) EF-hand_13(2) EF-hand_5(3) EF-hand_6(3) EF-hand_7(2) EF-
TargetP:	Secreted (Class 1 C0.024; M0.060; S0.952; _0.039)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	324 aa (-cTP 322)
Molecular Weight	38.76 kDA(-cTP )
PI	4.78(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data