PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G28730.1 nuclease

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G43722.1 11 Arabidopsis thaliana 1E-58 217 46 57 0 (0) _
AT5G41980.1 11 Arabidopsis thaliana 1E-20 202 29 49 0 (0) _
AT3G30525.1 11 Arabidopsis thaliana 1E-20 68 60 70 0 (0) _
Os06g38920.1 7 Oryza sativa 3E-38 209 38 55 0 (0) M
Os05g51760.1 7 Oryza sativa 1E-36 209 37 55 0 (0) M
ChrUn.fgenesh.mRNA.24 7 Oryza sativa 1E-35 207 37 51 0 (0)
GRMZM2G369945_P01 3.21 Zea mays 9E-11 113 33 52 0 (0) M
GRMZM2G396411_P01 3.21 Zea mays 1E-10 113 33 52 0 (0) M
GRMZM2G322390_P01 3.21 Zea mays 1E-10 121 31 51 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DDE_Tnp_1(1) DDE_Tnp_4(1) HTH_38(1) HTH_Tnp_4(1) T_Ag_DNA_bind(1)
TargetP:	Cytoplasm (Class 2 C0.083; M0.098; S0.118; _0.843)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	296 aa (-cTP 278)
Molecular Weight	34.10 kDA(-cTP )
PI	4.79(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data