PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G28590.1   DNA-binding family protein

Lab Annot. DNA-binding protein
Mapman: 28.99 DNA.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G04590.2 11Arabidopsis thaliana3E-6723254633 (0)_
AT3G04590.1 11Arabidopsis thaliana2E-4313758673 (0)_
AT4G25320.1 11Arabidopsis thaliana3E-2213641550 (0)_
Os09g31470.1 7Oryza sativa3E-2414839540 (0)_
Os04g49990.2 7Oryza sativa9E-2313041540 (0)_
Os04g49990.1 7Oryza sativa9E-2313041540 (0)_
GRMZM2G124638_P06 3.21Zea mays3E-2315538541 (1)C
v1_GRMZM2G124638_P06 4a53Zea mays3E-23155385419 (19)C
Zm00001eb035320_P003 agpv5Zea mays3E-2315538540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PCC(1) TIR(1)
TargetP: Mitochondria (Class 3 C0.009; M0.696; S0.009; _0.149)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 216 aa (-cTP 156)
Molecular Weight 22.54 kDA(-cTP )
PI 9.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help