PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G28520.1   Mannose-binding lectin superfamily protein

Lab Annot.
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G28520.2 11Arabidopsis thaliana04531001000 (0)_
AT1G33790.1 11Arabidopsis thaliana3E-18046162732 (2)_
AT1G33790.4 11Arabidopsis thaliana1E-17946162730 (0)_
Os05g43240.3 7Oryza sativa2E-1526827430 (0)_
Os05g43240.2 7Oryza sativa2E-1526827430 (0)_
Os05g43240.1 7Oryza sativa3E-1526827430 (0)_
Zm00001eb369990_P001 agpv5Zea mays7E-1830027440 (0)_
v1_GRMZM2G170625_P01 4a53Zea mays1E-1727027430 (0)_
GRMZM2G170625_P02 3.21Zea mays8E-1726827430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Jacalin(3)
TargetP: Cytoplasm (Class 2 C0.124; M0.160; S0.082; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 453 aa (-cTP 424)
Molecular Weight 50.21 kDA(-cTP )
PI 5.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20702726(mature seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help