PPDB

The Plant Proteome Database

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AT5G28400.1   embryo defective protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G28320.1 11Arabidopsis thaliana099984854 (4)_
AT3G61780.1 11Arabidopsis thaliana0876798211 (5)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1357(1) DUF2175(1) Ribosomal_S7(1) RNA_helicase(1)
TargetP: Cytoplasm (Class 4 C0.015; M0.416; S0.123; _0.624)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 973 aa (-cTP 950)
Molecular Weight 109.87 kDA(-cTP )
PI 5.14(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help