PPDB

The Plant Proteome Database

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AT5G28390.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G52660.1 11Arabidopsis thaliana8E-10123769690 (0)_
AT3G52660.3 11Arabidopsis thaliana8E-10123769690 (0)_
AT3G52660.2 11Arabidopsis thaliana8E-10123769690 (0)_
Os11g04390.3 7Oryza sativa3E-4320340580 (0)C
Os11g04390.2 7Oryza sativa5E-4220340580 (0)_
Os12g04180.2 7Oryza sativa2E-4120340580 (0)_
Zm00001eb196360_P002 agpv5Zea mays8E-4010167820 (0)_
v1_GRMZM2G075942_P01 4a53Zea mays9E-4010167829 (9)_
Zm00001eb196360_P003 agpv5Zea mays9E-4010167820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_7(1) RRM_occluded(1)
TargetP: Cytoplasm (Class 2 C0.177; M0.084; S0.063; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 180 aa (-cTP 151)
Molecular Weight 19.69 kDA(-cTP )
PI 9.76(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help