PPDB

The Plant Proteome Database

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AT5G28380.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G28340.1 11Arabidopsis thaliana03441001000 (0)_
AT5G28380.2 11Arabidopsis thaliana02831001000 (0)_
AT3G60960.1 11Arabidopsis thaliana5E-16730276850 (0)M
Os05g30240.1 7Oryza sativa8E-4331533543 (3)M
Os11g24570.1 7Oryza sativa1E-1831527462 (2)M
Os04g40130.1 7Oryza sativa7E-1629325430 (0)S
v1_GRMZM2G164018_P01 4a53Zea mays2E-3931531543 (3)C
GRMZM2G164018_P01 3.21Zea mays2E-3931531542 (2)C
v1_GRMZM2G164018_P02 4a53Zea mays3E-3931531543 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PHD(1) PPR(8) PPR_1(7) PPR_2(7) PPR_3(6) TPR_12(3) TPR_19(4)
TargetP: Cytoplasm (Class 2 C0.137; M0.130; S0.046; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 390 aa (-cTP 325)
Molecular Weight 43.89 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help