PPDB

PPDB	The Plant Proteome Database

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AT5G28340.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G28380.1 11 Arabidopsis thaliana 0 344 100 100 0 (0) _
AT5G28380.2 11 Arabidopsis thaliana 0 283 100 100 0 (0) _
AT3G60960.1 11 Arabidopsis thaliana 7E-166 302 76 85 0 (0) M
Os05g30240.1 7 Oryza sativa 2E-42 315 33 54 3 (3) M
Os11g24570.1 7 Oryza sativa 2E-18 315 27 46 2 (2) M
Os04g40130.1 7 Oryza sativa 5E-16 293 25 43 0 (0) S
v1_GRMZM2G164018_P02 4a53 Zea mays 8E-39 315 31 54 3 (3) M
GRMZM2G164018_P02 3.21 Zea mays 8E-39 315 31 54 2 (2) M
Zm00001eb047560_P002 agpv5 Zea mays 8E-39 315 31 54 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PHD(2) PPR(8) PPR_1(7) PPR_2(7) PPR_3(5) TPR_12(3) TPR_19(3) zf-CHY(1)
TargetP:	Cytoplasm (Class 2 C0.209; M0.130; S0.048; _0.897)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	435 aa (-cTP 421)
Molecular Weight	48.86 kDA(-cTP )
PI	6.60(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data