PPDB

PPDB	The Plant Proteome Database

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AT5G28300.1 Duplicated homeodomain-like superfamily protein

Lab Annot.

trihelix DNA-binding protein, putative
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G76890.2 11 Arabidopsis thaliana 5E-45 275 39 56 0 (0) _
AT1G76880.1 11 Arabidopsis thaliana 5E-44 255 40 58 0 (0) _
AT5G47660.1 11 Arabidopsis thaliana 5E-29 273 31 48 0 (0) _
Os03g02240.1 7 Oryza sativa 2E-43 265 36 52 15 (15) C
Os02g43300.1 7 Oryza sativa 3E-32 258 36 51 0 (0) _
Os02g01380.1 7 Oryza sativa 9E-31 269 32 47 0 (0) _
v1_GRMZM2G063203_P02 4a53 Zea mays 4E-47 469 31 45 4 (4) _
GRMZM2G063203_P02 3.21 Zea mays 4E-47 469 31 45 0 (0) _
Zm00001eb186200_P005 agpv5 Zea mays 4E-47 469 31 45 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MADF_DNA_bdg(3) Myb_DNA-bind_4(2) Myb_DNA-bind_6(2) Myb_DNA-binding(2)
TargetP:	Chloroplast (Class 3 C0.748; M0.113; S0.033; _0.330)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	619 aa (-cTP 580)
Molecular Weight	71.28 kDA(-cTP 67.09)
PI	6.74(-cTP 6.83)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)

Comparative Proteomics Data