PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G27980.1   Seed maturation protein

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22490.1 11Arabidopsis thaliana6E-4812965774 (3)_
AT3G22500.1 11Arabidopsis thaliana1E-4517755666 (4)_
AT1G03120.1 11Arabidopsis thaliana9E-3415947660 (0)_
Os06g23350.1 7Oryza sativa7E-2014047600 (0)_
Os03g06360.1 7Oryza sativa1E-1112360680 (0)_
Os03g53610.1 7Oryza sativa2E-115261750 (0)_
Zm00001eb057120_P001 agpv5Zea mays1E-2712554690 (0)_
GRMZM2G025857_P01 3.21Zea mays1E-2712554690 (0)_
v1_GRMZM2G025857_P01 4a53Zea mays1E-2712554690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SMP(3)
TargetP: Cytoplasm (Class 1 C0.060; M0.074; S0.062; _0.947)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 192 aa (-cTP 162)
Molecular Weight 19.52 kDA(-cTP )
PI 4.89(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help