PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G27920.1   F-box family protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01720.1 11Arabidopsis thaliana1E-11863638600 (0)S
AT4G15475.1 11Arabidopsis thaliana1E-4146728470 (0)_
AT2G25490.1 11Arabidopsis thaliana3E-3049227450 (0)_
Os12g36670.1 7Oryza sativa063649690 (0)_
Os11g01780.1 7Oryza sativa3E-10764536570 (0)_
Os12g01760.1 7Oryza sativa2E-10362136570 (0)M
Zm00001eb410120_P001 agpv5Zea mays063648660 (0)_
Zm00001eb137200_P001 agpv5Zea mays063350680 (0)_
GRMZM2G022298_P01 3.21Zea mays063350680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_1(9) LRR_4(16) LRR_6(17) LRR_8(7)
TargetP: Cytoplasm (Class 4 C0.304; M0.037; S0.062; _0.562)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 642 aa (-cTP 602)
Molecular Weight 70.57 kDA(-cTP )
PI 8.14(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help