PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G27910.1   nuclear factor Y%2C subunit C8

Lab Annot.
Mapman: 27.3.16 RNA.regulation of transcription.CCAAT box binding factor family, HAP5
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50490.1 11Arabidopsis thaliana9E-7817569810 (0)_
AT5G50480.1 11Arabidopsis thaliana3E-5016854700 (0)_
AT5G50470.1 11Arabidopsis thaliana3E-4618246600 (0)_
Os09g30310.1 7Oryza sativa1E-369659810 (0)_
Os08g38780.1 7Oryza sativa8E-369459810 (0)C
Os02g07450.1 7Oryza sativa1E-349656800 (0)_
GRMZM2G174776_P01 3.21Zea mays6E-3897608114 (14)_
Zm00001eb199430_P001 agpv5Zea mays6E-389760810 (0)_
Zm00001eb033910_P001 agpv5Zea mays8E-3814250650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(1) Histone(1)
TargetP: Cytoplasm (Class 2 C0.122; M0.149; S0.094; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 187 aa (-cTP 164)
Molecular Weight 20.61 kDA(-cTP )
PI 4.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help