PPDB

 The Plant Proteome Database

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AT5G27870.1   Plant invertase/pectin methylesterase inhibitor superfamily
Lab Annot. putative pectinesterase
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05610.1 11Arabidopsis thaliana068370820 (0)M
AT5G49180.1 11Arabidopsis thaliana056151680 (0)S
AT3G06830.1 11Arabidopsis thaliana2E-17856447650 (0)S
Os03g18860.1 7Oryza sativa2E-17853048670 (0)S
Os07g49100.1 7Oryza sativa3E-16552646630 (0)S
Os04g38560.1 7Oryza sativa2E-14653240600 (0)S
GRMZM2G321870_P01 3.21Zea mays8E-17753647660 (0)S
Zm00001eb014020_P001 agpv5Zea mays8E-17753647660 (0)S
Zm00001eb014020_P007 agpv5Zea mays8E-17753647660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF5521(1) Pectinesterase(2) PMEI(1)
TargetP: Cytoplasm (Class 4 C0.026; M0.347; S0.298; _0.614)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 732 aa (-cTP 701)
Molecular Weight 78.48 kDA(-cTP )
PI 6.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help