PPDB

PPDB	The Plant Proteome Database

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AT5G27760.1 Hypoxia-responsive family protein

Lab Annot.

Hypoxia-responsive protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G05550.1 11 Arabidopsis thaliana 3E-40 94 79 90 0 (0) _
AT5G27760.2 11 Arabidopsis thaliana 4E-34 54 100 100 0 (0) _
Os02g37930.1 7 Oryza sativa 4E-38 88 67 81 0 (0) _
Os07g47670.2 7 Oryza sativa 4E-30 89 66 85 0 (0) _
Os07g47670.1 7 Oryza sativa 4E-30 89 66 85 0 (0) _
v1_GRMZM2G159691_P01 4a53 Zea mays 7E-39 88 65 81 0 (0) _
Zm00001eb183530_P001 agpv5 Zea mays 7E-39 88 65 81 0 (0) _
GRMZM2G159691_P01 3.21 Zea mays 7E-39 88 65 81 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HIG_1_N(1)
TargetP:	Cytoplasm (Class 3 C0.257; M0.065; S0.041; _0.740)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	96 aa (-cTP 34)
Molecular Weight	10.66 kDA(-cTP )
PI	9.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data