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PPDB	The Plant Proteome Database

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AT5G27680.1 RECQ helicase SIM

Lab Annot.

Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G27680.2 11 Arabidopsis thaliana 0 858 100 100 0 (0) _
AT5G27680.3 11 Arabidopsis thaliana 0 858 100 100 0 (0) _
AT5G27680.4 11 Arabidopsis thaliana 0 858 100 100 0 (0) _
Os05g05810.1 7 Oryza sativa 0 876 49 65 0 (0) _
Os05g05810.2 7 Oryza sativa 0 876 47 63 0 (0) _
Os07g48360.1 7 Oryza sativa 9E-49 222 44 61 0 (0) _
GRMZM2G090963_P02 3.21 Zea mays 0 865 49 65 0 (0) _
v1_GRMZM2G090963_P02 4a53 Zea mays 0 865 49 65 0 (0) _
Zm00001eb354210_P001 agpv5 Zea mays 0 865 49 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) Helicase_C(1) RecQ_Zn_bind(1) ResIII(1) UBA(1)
TargetP:	Cytoplasm (Class 2 C0.071; M0.024; S0.066; _0.802)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	858 aa (-cTP 801)
Molecular Weight	97.47 kDA(-cTP )
PI	7.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data