PPDB

PPDB	The Plant Proteome Database

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AT5G27660.1 Trypsin family protein with PDZ domain-containing protein

Lab Annot.

DEG14 protease (also named PARK13)
Mapman: 29.5.5.1.1* protein.degradation.serine protease.PA.S1

Curated Location

mitochondria (Pubmed: 25161662 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G27660.2 11 Arabidopsis thaliana 0 430 98 98 0 (0) M
AT3G27925.1 11 Arabidopsis thaliana 9E-33 333 33 49 765 (535) C
AT3G27925.2 11 Arabidopsis thaliana 9E-33 333 33 49 0 (0) C
Os11g14170.1 7 Oryza sativa 1E-109 336 56 71 0 (0) M
Os05g49380.2 7 Oryza sativa 1E-33 336 33 50 25 (25) C
Os05g49380.1 7 Oryza sativa 1E-33 336 33 50 25 (25) C
Zm00001eb168260_P004 agpv5 Zea mays 2E-155 406 59 72 0 (0) M
v1_GRMZM2G017804_P01 4a53 Zea mays 2E-155 406 59 72 1 (1) M
GRMZM2G017804_P01 3.21 Zea mays 2E-155 406 59 72 1 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arteri_nsp7a(2) LSM(1) PDZ(1) PDZ_2(1) PDZ_6(2) Peptidase_S32(2) Peptidase_S46(2
TargetP:	Mitochondria (Class 5 C0.279; M0.366; S0.034; _0.042)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	424 aa (-cTP 328)
Molecular Weight	45.31 kDA(-cTP )
PI	8.79(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data