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The Plant Proteome Database

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AT5G27600.1   long-chain acyl-CoA synthetase 7

Lab Annot. LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7)
Mapman: 11.1.8 lipid metabolism.FA synthesis and FA elongation.acyl coa ligase
Curated Location peroxisome

TAIR curated location: peroxisome16256065
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05970.1 11Arabidopsis thaliana06587687193 (67)C
AT1G49430.1 11Arabidopsis thaliana1E-157643395817 (8)_
AT4G23850.1 11Arabidopsis thaliana4E-1576274059203 (140)_
Os12g04990.1 7Oryza sativa069371830 (0)M
Os11g04980.1 7Oryza sativa069970820 (0)M
Os11g04980.2 7Oryza sativa069969820 (0)M
Zm00001eb404990_P003 agpv5Zea mays048175850 (0)_
GRMZM2G176546_P01 3.21Zea mays036076851 (1)_
v1_GRMZM2G176546_P01 4a53Zea mays036076856 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AMP-binding(1) AMP-binding_C(2)
TargetP: Chloroplast (Class 5 C0.498; M0.137; S0.047; _0.480)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 700 aa (-cTP 636)
Molecular Weight 77.35 kDA(-cTP 70.14)
PI 6.15(-cTP 6.44)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2247Detail       seedlings [A. thaliana] total tissue atg5
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
19329564(peroxisomes (leaf))
21533090(plasmodesmata-crude)
21311031(mitochondria)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help