PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G27580.1   AGAMOUS-like 89

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G27944.1 11Arabidopsis thaliana1E-13722491950 (0)C
AT5G27070.1 11Arabidopsis thaliana3E-13022687930 (0)C
AT5G26950.1 11Arabidopsis thaliana1E-12822687930 (0)C
Os03g38610.1 7Oryza sativa5E-0911635610 (0)_
Os01g18440.1 7Oryza sativa2E-0813130510 (0)_
Os01g18420.1 7Oryza sativa4E-089936540 (0)_
Zm00001eb243490_P001 agpv5Zea mays2E-108338620 (0)M
GRMZM5G839969_P01 3.21Zea mays2E-108338620 (0)M
v1_GRMZM2G411477_P01 4a53Zea mays3E-108338620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF848(1) GIT_CC(1) Jnk-SapK_ap_N(2) SRF-TF(2)
TargetP: Chloroplast (Class 3 C0.730; M0.149; S0.034; _0.190)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 223 aa (-cTP 195)
Molecular Weight 25.59 kDA(-cTP 22.47)
PI 8.78(-cTP 6.31)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help