PPDB

 The Plant Proteome Database

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AT5G27520.1   peroxisomal adenine nucleotide carrier 2
Lab Annot. peroxisomal ATP carrier 2 (PNC2)
Mapman: 34.17 transport.peroxisomes
Curated Location peroxisome (Pubmed: 18931141 19073763 21472859 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05290.1 11Arabidopsis thaliana032486920 (0)_
AT2G39970.1 11Arabidopsis thaliana4E-23315244746 (40)_
AT5G66380.1 11Arabidopsis thaliana6E-1730123460 (0)M
Os05g32630.1 7Oryza sativa3E-149327668112 (12)_
Os03g15860.1 7Oryza sativa1E-2027728462 (2)_
Os09g33470.1 7Oryza sativa2E-1929627450 (0)C
GRMZM2G149211_P01 3.21Zea mays3E-13532766813 (3)_
v1_GRMZM2G149211_P01 4a53Zea mays3E-13532766812 (2)_
Zm00001eb350910_P001 agpv5Zea mays3E-13532766810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Mito_carr(3)
TargetP: Cytoplasm (Class 2 C0.042; M0.155; S0.097; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 3 TMs
TAT position:
Length 321 aa (-cTP 277)
Molecular Weight 35.16 kDA(-cTP )
PI 9.86(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help