PPDB

The Plant Proteome Database

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AT5G27490.1   Integral membrane Yip1 family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05280.1 11Arabidopsis thaliana028190951 (1)_
AT2G39805.1 11Arabidopsis thaliana2E-5728238550 (0)_
AT2G39805.2 11Arabidopsis thaliana4E-5628338550 (0)_
Os01g42480.1 7Oryza sativa2E-140292707912 (12)_
Os01g42480.2 7Oryza sativa2E-105223697612 (12)_
Os05g38180.1 7Oryza sativa9E-5327737530 (0)_
Zm00001eb161830_P001 agpv5Zea mays1E-14029170800 (0)_
GRMZM2G020140_P01 3.21Zea mays1E-14029170807 (7)_
v1_GRMZM2G020140_P01 4a53Zea mays1E-14029170805 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: YIF1(1) Yip1(1)
TargetP: Cytoplasm (Class 2 C0.138; M0.115; S0.083; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 282 aa (-cTP 265)
Molecular Weight 31.16 kDA(-cTP )
PI 6.95(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


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