PPDB

PPDB	The Plant Proteome Database

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AT5G27460.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G02150.1 11 Arabidopsis thaliana 4E-76 466 33 53 162 (64) M
AT4G02820.1 11 Arabidopsis thaliana 8E-74 441 32 56 0 (0) M
AT1G60770.1 11 Arabidopsis thaliana 7E-64 372 33 53 1 (1) _
Os02g55310.1 7 Oryza sativa 4E-139 406 49 67 0 (0) M
Os12g34340.1 7 Oryza sativa 2E-72 442 30 52 0 (0) M
Os04g46010.1 7 Oryza sativa 6E-67 377 33 54 31 (31) C
Zm00001eb192360_P001 agpv5 Zea mays 2E-136 424 48 66 0 (0) C
v1_GRMZM2G066456_P01 4a53 Zea mays 2E-136 424 48 66 0 (0) C
GRMZM2G066456_P01 3.21 Zea mays 2E-136 424 48 66 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MRP-S27(1) PPR(8) PPR_1(4) PPR_2(7) PPR_3(6) PPR_long(3) TPR_14(4) TPR_19(3) TPR
TargetP:	Chloroplast (Class 5 C0.421; M0.247; S0.007; _0.051)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	491 aa (-cTP 467)
Molecular Weight	56.20 kDA(-cTP 53.60)
PI	8.76(-cTP 8.36)

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data