PPDB

PPDB	The Plant Proteome Database

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AT5G27420.1 carbon/nitrogen insensitive 1

Lab Annot.

carbon/nitrogen insensitive 1
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G05200.1 11 Arabidopsis thaliana 5E-171 393 65 74 1 (1) S
AT1G72200.1 11 Arabidopsis thaliana 4E-50 234 41 55 0 (0) _
AT4G40070.1 11 Arabidopsis thaliana 3E-48 275 38 53 0 (0) M
Os09g29310.1 7 Oryza sativa 6E-51 162 53 65 0 (0) S
Os08g37760.1 7 Oryza sativa 3E-42 148 52 62 0 (0) M
Os02g52210.1 7 Oryza sativa 5E-42 290 36 48 0 (0) M
GRMZM2G082653_P01 3.21 Zea mays 1E-63 328 40 52 1 (1) _
Zm00001eb315600_P001 agpv5 Zea mays 1E-63 328 40 52 0 (0) _
v1_GRMZM2G082653_P01 4a53 Zea mays 1E-63 328 40 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC
TargetP:	Secreted (Class 3 C0.005; M0.031; S0.868; _0.346)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	368 aa (-cTP 325)
Molecular Weight	40.29 kDA(-cTP )
PI	9.24(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19253305(phosphoproteins (etiolated seedling))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data