PPDB

PPDB	The Plant Proteome Database

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AT5G27270.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein (EMB976)
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G27270.4 11 Arabidopsis thaliana 0 879 100 100 0 (0) C
AT5G27270.2 11 Arabidopsis thaliana 0 833 100 100 0 (0) _
AT5G27270.3 11 Arabidopsis thaliana 0 833 100 100 0 (0) _
Os06g02120.1 7 Oryza sativa 0 722 50 66 0 (0) C
Os06g02120.2 7 Oryza sativa 0 534 55 72 0 (0) C
Os06g02120.3 7 Oryza sativa 0 534 55 72 0 (0) C
Zm00001eb378980_P001 agpv5 Zea mays 0 749 48 66 0 (0) C
GRMZM2G093291_P01 3.21 Zea mays 0 749 48 66 11 (11) C
Zm00001eb378980_P002 agpv5 Zea mays 0 1000 47 64 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) Med10(1) MNE1(4) MRP-S27(3) Mrr_N(1) PPR(22) PPR_1(16) PPR_2(19) PPR_3(
TargetP:	Chloroplast (Class 2 C0.844; M0.060; S0.054; _0.230)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1038 aa (-cTP 1007)
Molecular Weight	117.45 kDA(-cTP 113.90)
PI	8.77(-cTP 8.60)

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
544	Detail								leaf [A. thaliana]	stroma (FPLC) <600 kDa (LMA)	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data