PPDB

The Plant Proteome Database

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AT5G27220.1   Frigida-like protein

Lab Annot. Frigida-like protein
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G27220.3 11Arabidopsis thaliana011811001000 (0)_
AT5G27220.4 11Arabidopsis thaliana0118193940 (0)_
AT5G27220.2 11Arabidopsis thaliana0118193940 (0)_
Os09g07360.2 7Oryza sativa3E-1232124440 (0)_
Os09g07360.1 7Oryza sativa7E-1232124440 (0)_
Os09g07380.1 7Oryza sativa6E-1024324460 (0)_
Zm00001eb094390_P003 agpv5Zea mays9E-1217327520 (0)_
Zm00001eb094390_P002 agpv5Zea mays9E-1217327520 (0)_
Zm00001eb094390_P001 agpv5Zea mays9E-1217327520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEP(2) Frigida(8)
TargetP: Cytoplasm (Class 2 C0.139; M0.154; S0.041; _0.820)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1181 aa (-cTP 1165)
Molecular Weight 135.83 kDA(-cTP )
PI 5.44(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help