PPDB

PPDB	The Plant Proteome Database

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AT5G27200.1 acyl carrier protein 5

Lab Annot.

acyl carrier protein 5
Mapman: 11.1.12 lipid metabolism.FA synthesis and FA elongation.ACP protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G05020.1 11 Arabidopsis thaliana 3E-55 138 68 80 112 (88) C
AT1G54580.1 11 Arabidopsis thaliana 3E-42 111 65 80 161 (152) C
AT1G54630.1 11 Arabidopsis thaliana 4E-42 112 65 77 265 (240) C
Os08g43580.1 7 Oryza sativa 2E-34 121 52 71 28 (28) C
Os12g34890.1 7 Oryza sativa 2E-31 111 56 72 34 (34) C
Os09g36860.1 7 Oryza sativa 9E-31 112 53 71 27 (27) C
GRMZM2G032878_P01 3.21 Zea mays 6E-32 134 47 66 52 (50) C
Zm00001eb331920_P001 agpv5 Zea mays 6E-32 134 47 66 0 (0) C
Zm00001eb202830_P002 agpv5 Zea mays 2E-31 110 55 72 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PP-binding(1) PP-binding_2(1) Ribosomal_L12_N(3)
TargetP:	Chloroplast (Class 1 C0.926; M0.010; S0.059; _0.042)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	139 aa (-cTP 85)
Molecular Weight	15.30 kDA(-cTP 9.31)
PI	4.87(-cTP 4.33)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2291	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)
19995723(chloroplast reference proteome)

Comparative Proteomics Data