PPDB

The Plant Proteome Database

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AT5G27130.1   AGAMOUS-like 39

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G48150.1 11Arabidopsis thaliana3E-8430954620 (0)_
AT1G50780.1 11Arabidopsis thaliana2E-5329745520 (0)S
AT5G38620.1 11Arabidopsis thaliana9E-1812138530 (0)_
Os12g21850.1 7Oryza sativa2E-099737570 (0)_
Os05g23780.1 7Oryza sativa5E-0914930440 (0)_
Os06g22760.1 7Oryza sativa9E-087240610 (0)_
GRMZM2G073357_P01 3.21Zea mays3E-089238540 (0)_
Zm00001eb286420_P001 agpv5Zea mays3E-089238540 (0)_
v1_GRMZM2G073357_P01 4a53Zea mays3E-089238540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DapB_N(2) DUF1131(1) SRF-TF(1)
TargetP: Cytoplasm (Class 3 C0.362; M0.040; S0.050; _0.888)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 306 aa (-cTP 275)
Molecular Weight 34.35 kDA(-cTP )
PI 4.46(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help