PPDB

 The Plant Proteome Database

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AT5G27110.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G11290.1 11Arabidopsis thaliana8E-14268135561 (1)C
AT4G18750.1 11Arabidopsis thaliana1E-14167735580 (0)C
AT3G57430.1 11Arabidopsis thaliana4E-13568434560 (0)C
Os01g10800.1 7Oryza sativa9E-14065134572 (2)C
Os03g56850.1 7Oryza sativa1E-13565735560 (0)M
Os12g15460.1 7Oryza sativa3E-13563437550 (0)_
v1_GRMZM2G077420_P01 4a53Zea mays4E-13468835550 (0)_
GRMZM2G077420_P01 3.21Zea mays4E-13468835550 (0)_
Zm00001eb213580_P002 agpv5Zea mays8E-13366034560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC3(2) ATP13(5) ChAPs(3) DUF5043(2) DYW_deaminase(2) PPR(14) PPR_1(13) PPR_2(
TargetP: Mitochondria (Class 5 C0.330; M0.331; S0.016; _0.296)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 691 aa (-cTP 650)
Molecular Weight 77.98 kDA(-cTP )
PI 6.79(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1745Detail        [A. thaliana] Col-0

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help