PPDB

The Plant Proteome Database

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AT5G27090.1   AGAMOUS-like 54

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G27090.2 11Arabidopsis thaliana6E-10718783830 (0)C
AT5G27070.1 11Arabidopsis thaliana1E-10319387900 (0)C
AT5G26950.1 11Arabidopsis thaliana3E-10119386900 (0)C
Os01g18440.1 7Oryza sativa1E-099832560 (0)_
Os01g18420.1 7Oryza sativa3E-0810830490 (0)_
Os03g38610.1 7Oryza sativa6E-088433610 (0)_
Zm00001eb243490_P001 agpv5Zea mays8E-127237610 (0)M
GRMZM5G839969_P01 3.21Zea mays8E-127237610 (0)M
v1_GRMZM2G411477_P01 4a53Zea mays8E-128432580 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SRF-TF(2)
TargetP: Chloroplast (Class 4 C0.596; M0.148; S0.040; _0.306)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 187 aa (-cTP 160)
Molecular Weight 21.74 kDA(-cTP 18.69)
PI 9.04(-cTP 7.65)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help