PPDB

 The Plant Proteome Database

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AT5G27070.1   AGAMOUS-like 53
Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G26950.1 11Arabidopsis thaliana029095960 (0)C
AT5G27944.1 11Arabidopsis thaliana1E-13022688930 (0)C
AT5G27580.1 11Arabidopsis thaliana1E-12922687930 (0)C
Os01g18440.1 7Oryza sativa3E-099832550 (0)_
Os03g38610.1 7Oryza sativa4E-098236600 (0)_
Os01g18420.1 7Oryza sativa7E-089834520 (0)_
Zm00001eb243490_P001 agpv5Zea mays2E-118734580 (0)M
GRMZM5G839969_P01 3.21Zea mays2E-118734580 (0)M
v1_GRMZM2G411477_P01 4a53Zea mays4E-118734580 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SRF-TF(2)
TargetP: Chloroplast (Class 3 C0.734; M0.150; S0.023; _0.222)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 287 aa (-cTP 259)
Molecular Weight 32.68 kDA(-cTP 29.56)
PI 8.57(-cTP 5.87)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help