PPDB

The Plant Proteome Database

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AT5G27050.1   AGAMOUS-like 101

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G27580.1 11Arabidopsis thaliana7E-6711588940 (0)C
AT5G27944.1 11Arabidopsis thaliana3E-6111684920 (0)C
AT5G27070.1 11Arabidopsis thaliana5E-6111684920 (0)C
Os03g38610.1 7Oryza sativa6E-097042670 (0)_
Os01g18420.1 7Oryza sativa2E-076940590 (0)_
Os01g18440.1 7Oryza sativa1E-069835560 (0)_
Zm00001eb243490_P001 agpv5Zea mays1E-096939630 (0)M
GRMZM5G839969_P01 3.21Zea mays1E-096939630 (0)M
v1_GRMZM2G411477_P01 4a53Zea mays2E-096939630 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Bestrophin(1) GIT_CC(1) SRF-TF(1)
TargetP: Cytoplasm (Class 5 C0.067; M0.040; S0.523; _0.557)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 120 aa (-cTP 109)
Molecular Weight 14.19 kDA(-cTP )
PI 9.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help