PPDB

PPDB	The Plant Proteome Database

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AT5G26980.1 syntaxin of plants 41

Lab Annot.

member of SYP4 Gene Family
Mapman: 31.4 cell.vesicle transport

Curated Location

TAIR curated location: trans-Golgi network transport vesicle & Golgi trans face10888666,11115874

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G26980.3 11 Arabidopsis thaliana 0 322 100 100 0 (0) M
AT5G26980.2 11 Arabidopsis thaliana 0 322 100 100 0 (0) M
AT3G05710.2 11 Arabidopsis thaliana 0 332 85 91 0 (0) M
Os06g02570.1 7 Oryza sativa 1E-149 332 69 81 0 (0) M
Os01g15110.1 7 Oryza sativa 4E-09 208 29 48 3 (3) _
Zm00001eb221480_P001 agpv5 Zea mays 1E-155 324 70 82 0 (0) M
GRMZM2G162544_P01 3.21 Zea mays 1E-155 324 70 82 0 (0) M
Zm00001eb120350_P003 agpv5 Zea mays 7E-155 325 71 83 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Amnionless(1) BSD(2) DUF4778(1) EF-G-binding_N(2) MCPsignal(1) Prominin(2) SNARE
TargetP:	Mitochondria (Class 2 C0.231; M0.907; S0.003; _0.012)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	322 aa (-cTP 282)
Molecular Weight	36.13 kDA(-cTP )
PI	8.70(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21826108(SYP trans-Golgi-filtered)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data