PPDB

 The Plant Proteome Database

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AT5G26860.1   lon protease 1
Lab Annot. LON1
Mapman: 29.5.5.7* protein.degradation.serine protease SJ.S16
Curated Location mitochondria (Pubmed: 17478548 )

TAIR curated location: mitochondrion14671022,9668139
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05790.2 11Arabidopsis thaliana095175850 (0)C
AT3G05790.1 11Arabidopsis thaliana096274842 (0)C
AT3G05780.1 11Arabidopsis thaliana099766760 (0)M
Os07g48960.1 7Oryza sativa0947748339 (39)C
Os03g19350.1 7Oryza sativa071569780 (0)C
Os09g36300.4 7Oryza sativa2E-157722405914 (14)_
Zm00001eb111810_P002 agpv5Zea mays095073840 (0)S
Zm00001eb331350_P003 agpv5Zea mays095073830 (0)_
Zm00001eb331350_P002 agpv5Zea mays095273830 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_11(2) AAA_14(1) AAA_16(1) AAA_18(1) AAA_2(1) AAA_22(1) AAA_3(1) AAA_3
TargetP: Chloroplast (Class 4 C0.620; M0.113; S0.001; _0.282)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 985 aa (-cTP 918)
Molecular Weight 109.16 kDA(-cTP 101.48)
PI 5.63(-cTP 5.28)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2251Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2286Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
17137349(ATP-binding-mitochondria cell suspension)
18463617(suspension cells-phosphorylated proteins)
19452453(14-3-3-interacting proteins)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21693672(wound-regulated leaf proteome (AOS mutant))
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help