PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G26760.1   RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein

Lab Annot. unknown protein
Mapman: 29.4.5 protein.postranslational modification.phosphatase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G26760.2 11Arabidopsis thaliana04301001001 (1)_
Os05g04370.1 7Oryza sativa5E-7632845640 (0)_
Zm00001eb354720_P003 agpv5Zea mays2E-7632143630 (0)S
GRMZM2G065622_P01 3.21Zea mays2E-7632143630 (0)M
v1_GRMZM2G065622_P01 4a53Zea mays2E-7632143630 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 4 C0.368; M0.042; S0.077; _0.715)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 430 aa (-cTP 357)
Molecular Weight 46.68 kDA(-cTP )
PI 4.82(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help