PPDB

 The Plant Proteome Database

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AT5G26040.1   histone deacetylase 2
Lab Annot.
Mapman: 27.3.55 RNA.regulation of transcription.HDA
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G26040.2 11Arabidopsis thaliana038792920 (0)_
AT5G63110.1 11Arabidopsis thaliana1E-0726626380 (0)_
AT3G44680.1 11Arabidopsis thaliana3E-0733222360 (0)_
Os06g37420.1 7Oryza sativa2E-16233166796 (6)C
Os06g37420.2 7Oryza sativa5E-11324863772 (2)C
Os07g41090.1 7Oryza sativa6E-0715629440 (0)_
Zm00001eb385130_P003 agpv5Zea mays9E-15733062790 (0)C
GRMZM2G008425_P01 3.21Zea mays9E-15733062790 (0)C
v1_GRMZM2G008425_P01 4a53Zea mays9E-15733062790 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Hist_deacetyl(2)
TargetP: Cytoplasm (Class 4 C0.009; M0.263; S0.131; _0.513)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 359 aa (-cTP 323)
Molecular Weight 40.65 kDA(-cTP )
PI 6.11(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help