PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G26030.1   ferrochelatase 1

Lab Annot. ferrochelatase I (FC1) (non-photosynthetic, but induced)
Mapman: 19.2 tetrapyrrole synthesis.ferrochelatase
Curated Location plastid (Pubmed: 23198870 21565502 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G26030.2 11Arabidopsis thaliana04661001000 (0)C
AT2G30390.1 11Arabidopsis thaliana3E-178349688376 (68)C
AT2G30390.2 11Arabidopsis thaliana1E-174359668168 (60)C
Os09g12560.1 7Oryza sativa045568816 (6)_
Os09g12560.2 7Oryza sativa045568816 (6)_
Os05g29760.2 7Oryza sativa0340728818 (18)C
Zm00001eb097670_P002 agpv5Zea mays038774880 (0)S
GRMZM2G047095_P05 3.21Zea mays038774881 (1)S
v1_GRMZM2G047095_P05 4a53Zea mays038774882 (2)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ferrochelatase(1)
TargetP: Chloroplast (Class 2 C0.869; M0.141; S0.023; _0.073)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 466 aa (-cTP 431)
Molecular Weight 52.03 kDA(-cTP 48.07)
PI 5.60(-cTP 5.11)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help