PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G25880.1 NADP-malic enzyme 3

Lab Annot.

NADP-malic enzyme 3 (NADP-ME3)
Mapman: 8.2.10 TCA / org.transformation.other organic acid transformations.malic

Curated Location

cytosol (Pubmed: 1972587 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G25880.2 11 Arabidopsis thaliana 0 560 100 100 0 (0) _
AT5G11670.1 11 Arabidopsis thaliana 0 588 90 95 629 (437) _
AT5G25880.3 11 Arabidopsis thaliana 0 461 100 100 0 (0) _
Os05g09440.1 7 Oryza sativa 0 568 81 91 16 (16) _
Os01g52500.2 7 Oryza sativa 0 573 79 91 14 (14) M
Os01g52500.3 7 Oryza sativa 0 573 79 91 14 (14) _
v1_GRMZM2G159724_P01 4a53 Zea mays 0 573 80 92 24 (24) _
GRMZM2G159724_P01 3.21 Zea mays 0 573 80 92 23 (15) _
v1_GRMZM2G159724_P03 4a53 Zea mays 0 573 80 92 28 (28) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	malic(1) Malic_M(1) RsgA_GTPase(2)
TargetP:	Cytoplasm (Class 1 C0.083; M0.098; S0.104; _0.946)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	588 aa (-cTP 579)
Molecular Weight	64.61 kDA(-cTP )
PI	6.55(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
94	Detail								root [B. rapa]	plastid stroma
102	Detail								petal [B. oleracea]	plastid stroma	Alboglabra
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null

* For details about the exprimental sources click here.

Published Proteomics Data

16242667(mature Pollen)
16247729(mature Pollen)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19508356(mature pollen grains and pollen tubes)

Comparative Proteomics Data