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AT5G25780.1 eukaryotic translation initiation factor 3B-2

Lab Annot.

eukaryotic translation initiation factor 3B-2 (EIF3B-2)
Mapman: 29.2.3 protein.synthesis.initiation

Curated Location

TAIR curated location: cytoplasm11029466

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G27640.1 11 Arabidopsis thaliana 0 709 95 97 188 (72) _
AT5G27640.3 11 Arabidopsis thaliana 0 709 95 97 0 (0) _
AT5G27640.2 11 Arabidopsis thaliana 0 735 92 94 188 (72) _
Os10g41960.1 7 Oryza sativa 0 690 72 84 50 (50) _
Os02g39350.1 7 Oryza sativa 7E-16 300 23 44 14 (14) _
Zm00001eb024200_P001 agpv5 Zea mays 0 690 70 84 0 (0) _
v1_GRMZM2G174757_P01 4a53 Zea mays 0 690 70 84 75 (75) _
GRMZM2G174757_P01 3.21 Zea mays 0 690 70 84 126 (62) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(7) eIF2A(4) FAD_binding_9(1) Proteasom_Rpn13(3) RRM_1(1)
TargetP:	Secreted (Class 5 C0.109; M0.068; S0.543; _0.491)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	714 aa (-cTP 703)
Molecular Weight	82.18 kDA(-cTP )
PI	5.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1535	Detail								leaf [A. thaliana]		wild-type
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9
2268	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
20706207(cell cycle interactome (cell culture))
18686298(tonoplast - phosphoproteome (leaves))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data