PPDB

 The Plant Proteome Database

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AT5G25780.1   eukaryotic translation initiation factor 3B-2
Lab Annot. eukaryotic translation initiation factor 3B-2 (EIF3B-2)
Mapman: 29.2.3 protein.synthesis.initiation
Curated Location
TAIR curated location: cytoplasm11029466
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G27640.1 11Arabidopsis thaliana07099597110 (73)_
AT5G27640.3 11Arabidopsis thaliana070995970 (0)_
AT5G27640.2 11Arabidopsis thaliana07359294110 (73)_
Os10g41960.1 7Oryza sativa0690728450 (50)_
Os02g39350.1 7Oryza sativa7E-16300234414 (14)_
Zm00001eb024200_P001 agpv5Zea mays069070840 (0)_
v1_GRMZM2G174757_P01 4a53Zea mays0690708475 (75)_
GRMZM2G174757_P01 3.21Zea mays0690708471 (62)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC4_WD40(7) eIF2A(4) FAD_binding_9(1) Proteasom_Rpn13(3) RRM_1(1)
TargetP: Secreted (Class 5 C0.109; M0.068; S0.543; _0.491)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 714 aa (-cTP 703)
Molecular Weight 82.18 kDA(-cTP )
PI 5.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1535Detail       leaf [A. thaliana] wild-type
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2255Detail       leaf [A. thaliana] total seedlings gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
20706207(cell cycle interactome (cell culture))
18686298(tonoplast - phosphoproteome (leaves))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

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