PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G25760.1   peroxin4

Lab Annot. peroxin4
Mapman: 29.5.11.3 protein.degradation.ubiquitin.E2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25760.2 11Arabidopsis thaliana1E-1171571001001 (1)_
AT2G16740.1 11Arabidopsis thaliana2E-3314941610 (0)_
AT5G53300.2 11Arabidopsis thaliana2E-33147405921 (20)_
Os02g42314.2 7Oryza sativa5E-11115793974 (4)_
Os02g42314.1 7Oryza sativa6E-9113094974 (4)_
Os02g02830.1 7Oryza sativa1E-3314740610 (0)_
Zm00001eb248200_P001 agpv5Zea mays3E-11115793970 (0)_
Zm00001eb248200_P002 agpv5Zea mays3E-11115793970 (0)_
Zm00001eb248200_P003 agpv5Zea mays3E-11115793970 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Prok-E2_A(1) Prok-E2_B(1) RWD(1) UFC1(1) UQ_con(1)
TargetP: Cytoplasm (Class 2 C0.067; M0.192; S0.079; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 157 aa (-cTP 152)
Molecular Weight 17.71 kDA(-cTP )
PI 8.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help