PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G25630.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G25630.2 11 Arabidopsis thaliana 0 599 95 95 0 (0) _
AT5G25630.3 11 Arabidopsis thaliana 0 523 100 100 0 (0) _
AT5G21222.1 11 Arabidopsis thaliana 1E-176 459 54 72 18 (15) _
Os01g12810.3 7 Oryza sativa 9E-176 597 44 63 1 (1) _
Os01g12810.1 7 Oryza sativa 9E-176 597 44 63 1 (1) _
Os01g12810.2 7 Oryza sativa 9E-176 597 44 63 1 (1) _
GRMZM2G003869_P01 3.21 Zea mays 1E-174 466 51 72 28 (28) _
Zm00001eb315460_P001 agpv5 Zea mays 1E-174 466 51 72 0 (0) _
v1_GRMZM2G003869_P02 4a53 Zea mays 1E-174 466 51 72 15 (15) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(4) Clathrin(2) ECSIT(4) MRP-S27(3) Mtf2(2) NAD_binding_4(1) Phage_ABA_S(2)
TargetP:	Cytoplasm (Class 3 C0.423; M0.041; S0.018; _0.847)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	574 aa (-cTP 539)
Molecular Weight	63.89 kDA(-cTP )
PI	8.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data