PPDB

The Plant Proteome Database

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AT5G25520.1   SPOC domain / Transcription elongation factor S-II protein

Lab Annot. SPOC domain / Transcription elongation factor S-II protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25520.4 11Arabidopsis thaliana07351001000 (0)_
AT5G25520.5 11Arabidopsis thaliana07351001000 (0)_
AT5G25520.7 11Arabidopsis thaliana07351001000 (0)_
Os02g11780.1 7Oryza sativa1E-8566637510 (0)_
Os06g39480.1 7Oryza sativa2E-5133941590 (0)_
Os04g55190.1 7Oryza sativa4E-116450650 (0)C
Zm00001eb205470_P001 agpv5Zea mays5E-8859638530 (0)_
GRMZM2G022987_P01 3.21Zea mays5E-8859638530 (0)_
v1_GRMZM2G022987_P01 4a53Zea mays5E-8859638530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SPOC(1) TFIIS_M(2)
TargetP: Cytoplasm (Class 1 C0.081; M0.043; S0.036; _0.926)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 735 aa (-cTP 636)
Molecular Weight 80.62 kDA(-cTP )
PI 5.15(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help